Retraction

Hayai-Annotation Plants: an ultra-fast and comprehensive functional gene annotation system in plants

Paper Information

Record ID:
45746
Publication Date:
November 01, 2019
Retraction Date:
July 01, 2023 (2.4 years years ago)
Article Type:
Publisher:
Oxford Academic
Open Access:
Yes
PubMed ID:
Retraction PubMed ID:

Retraction Details

Nature of Retraction:

Retraction

Additional Notes:

see also: https://academic.oup.com/bioinformatics/article/36/22-23/5558/6042706;

Citations (18)

18
Total Citations
2
Post-Retraction
(11.1%)
16
Pre-Retraction
0
Same Day
Post-Retraction Citation Analysis
0 Within 30 days
2 Within 1 year
0 After 2+ years
339 Days since retraction (latest)
Chromosome-level genome assembly of Solanum pimpinellifolium
Hongyu Han, Xiuhong Li, Tianze Li et al. (9 authors)
Scientific Data Open Access
Published: Jun 2024
2 citations
339 days after retraction
Plant GARDEN: a portal website for cross-searching between different types of genomic and genetic resources in a wide variety of plant species
Hisako Ichihara, Manabu Yamada, Mitsuyo Kohara et al. (18 authors)
BMC Plant Biology Open Access
Published: Aug 2023
11 citations
42 days after retraction
Metabolites and microbial characteristics of Fu brick tea after natural fermentation
Hui Wu, Huihui Zhao, Jie Ding et al. (6 authors)
LWT Open Access
Published: Apr 2023
21 citations
74 days before retraction
An improved reference genome for Trifolium subterraneum L. provides insight into molecular diversity and intra-specific phylogeny
Kenta Shirasawa, Roger Moraga, Andrea Ghelfi et al. (9 authors)
Frontiers in Plant Science Open Access
Published: Feb 2023
7 citations
136 days before retraction
Chromosome-scale genome assembly of a Japanese chili pepper landrace, <i>Capsicum annuum</i> ‘Takanotsume’
Kenta Shirasawa, Munetaka Hosokawa, Y. Yasui et al. (5 authors)
DNA Research Open Access
Published: Dec 2022
16 citations
188 days before retraction
Chromosome-scale genome assembly of <i>Eustoma grandiflorum</i>, the first complete genome sequence in the genus <i>Eustoma</i>
Kenta Shirasawa, Ryohei Arimoto, Hideki Hirakawa et al. (9 authors)
G3 Genes Genomes Genetics Open Access
Published: Dec 2022
5 citations
194 days before retraction
A de novo genome assembly of <i>Solanum verrucosum</i> Schlechtendal, a Mexican diploid species geographically isolated from other diploid A-genome species of potato relatives
Aoi Hosaka, Rena Sanetomo, Kazuyoshi Hosaka
G3 Genes Genomes Genetics Open Access
Published: Jul 2022
11 citations
365 days before retraction
Paper citing Hayai-Annotation Plants: an ultra-fast and compreh...
Unknown Authors
Unknown Journal
Published: Apr 2022
456 days before retraction
<i>De novo</i> genome assembly and <i>in natura</i> epigenomics reveal salinity‐induced DNA methylation in the mangrove tree <i>Bruguiera gymnorhiza</i>
Matin Miryeganeh, Ferdinand Marlétaz, Daria Gavriouchkina et al. (4 authors)
New Phytologist Open Access
Published: Sep 2021
41 citations
652 days before retraction
Chromosome-scale genome assembly of <i>Eustoma grandiflorum</i>, the first complete genome sequence in family Gentianaceae
Kenta Shirasawa, Ryohei Arimoto, Hideki Hirakawa et al. (9 authors)
bioRxiv (Cold Spring Harbor Laboratory) Open Access
Published: Sep 2021
658 days before retraction
Comment on ‘Hayai-Annotation Plants: an ultrafast and comprehensive functional gene annotation system in plants’: the importance of taking the GO graph structure into account
Michiel Van Bel, Klaas Vandepoele
Bioinformatics Open Access
Published: Dec 2020
3 citations
942 days before retraction
Comparative transcriptome analysis implied a ZEP paralog was a key gene involved in carotenoid accumulation in yellow-fleshed sweetpotato
Keisuke Suematsu, Masaru Tanaka, Rie Kurata et al. (4 authors)
Scientific Reports Open Access
Published: Nov 2020
20 citations
947 days before retraction
KusakiDB v1.0: a novel approach for validation and completeness of protein orthologous groups
Andrea Ghelfi, Yasukazu Nakamura, Sachiko Isobe
bioRxiv (Cold Spring Harbor Laboratory) Open Access
Published: Nov 2020
963 days before retraction
Genome sequence of <i>Hydrangea macrophylla</i> and its application in analysis of the double flower phenotype
Kenji Nashima, Kenta Shirasawa, Andrea Ghelfi et al. (14 authors)
DNA Research Open Access
Published: Nov 2020
24 citations
971 days before retraction
Genome sequence of <i>Hydrangea macrophylla</i> and its application in analysis of the double flower phenotype
Kenji Nashima, Kenta Shirasawa, Andrea Ghelfi et al. (14 authors)
bioRxiv (Cold Spring Harbor Laboratory) Open Access
Published: Jun 2020
1111 days before retraction
Oxford Nanopore sequencing: new opportunities for plant genomics?
Kathryn Dumschott, Maximilian Schmidt, Harmeet Singh Chawla et al. (5 authors)
Journal of Experimental Botany Open Access
Published: May 2020
69 citations
1132 days before retraction
<i>De novo</i> whole-genome assembly in interspecific hybrid table grape, ‘Shine Muscat’
Kenta Shirasawa, Arata Azuma, Fumiya Taniguchi et al. (7 authors)
bioRxiv (Cold Spring Harbor Laboratory) Open Access
Published: Aug 2019
4 citations
1412 days before retraction
Phased genome sequence of an interspecific hybrid flowering cherry, ‘Somei-Yoshino’ (Cerasus × yedoensis)
Kenta Shirasawa, Tomoya Esumi, Hideki Hirakawa et al. (8 authors)
DNA Research Open Access
Published: Jun 2019
66 citations
1466 days before retraction
Quick Stats
Total Citations: 18
Years Since Retraction: 2.4 years
Open Access: Yes
Last Checked: Jul 24, 2025
Related Papers